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Detailed information for vg0514785383:

Variant ID: vg0514785383 (JBrowse)	Variation Type: SNP
Chromosome: chr05	Position: 14785383
Reference Allele: T	Alternative Allele: C
Primary Allele: T	Secondary Allele: C

Inferred Ancestral Allele : T (evidence from allele frequency in Oryza rufipogon: T: 0.94, C: 0.06, others allele: 0.00, population size: 300. )

Flanking Sequence (100 bp) in Reference Genome:

TAATCTCACTGAGTATGCCTTTCTTACGGCAAGACAGTGCCCAGTCACGCAAGCTCACTTGCTCCTCTGGAAGTTCAGGGTTTATTACCGGACGTGCGCA[T/C]
AGAACCTCGAACAAAAGAACCCCAAAGGAGAAGACATCTGATTTCTTGGTGAGTTTCTGCCTTCGAAAGTACTCCGGGTCAAGATATCCAAAGCTGCCTT

Reverse complement sequence

AAGGCAGCTTTGGATATCTTGACCCGGAGTACTTTCGAAGGCAGAAACTCACCAAGAAATCAGATGTCTTCTCCTTTGGGGTTCTTTTGTTCGAGGTTCT[A/G]
TGCGCACGTCCGGTAATAAACCCTGAACTTCCAGAGGAGCAAGTGAGCTTGCGTGACTGGGCACTGTCTTGCCGTAAGAAAGGCATACTCAGTGAGATTA

Allele Frequencies:

Allele Effect: