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Detailed information for vg0514785302:

Variant ID: vg0514785302 (JBrowse)	Variation Type: SNP
Chromosome: chr05	Position: 14785302
Reference Allele: T	Alternative Allele: C
Primary Allele: T	Secondary Allele: C

Inferred Ancestral Allele : T (evidence from allele frequency in Oryza rufipogon: T: 0.98, C: 0.02, others allele: 0.00, population size: 340. )

Flanking Sequence (100 bp) in Reference Genome:

AATCAGCAACACACTGCTCTGCAGTCTCTGTGAATTTCCTGAAGCACTGTGGGGTGATTTCCCCTTGGAGATGGGGGTCAATAATCTCACTGAGTATGCC[T/C]
TTCTTACGGCAAGACAGTGCCCAGTCACGCAAGCTCACTTGCTCCTCTGGAAGTTCAGGGTTTATTACCGGACGTGCGCATAGAACCTCGAACAAAAGAA

Reverse complement sequence

TTCTTTTGTTCGAGGTTCTATGCGCACGTCCGGTAATAAACCCTGAACTTCCAGAGGAGCAAGTGAGCTTGCGTGACTGGGCACTGTCTTGCCGTAAGAA[A/G]
GGCATACTCAGTGAGATTATTGACCCCCATCTCCAAGGGGAAATCACCCCACAGTGCTTCAGGAAATTCACAGAGACTGCAGAGCAGTGTGTTGCTGATT

Allele Frequencies:

Allele Effect: