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Detailed information for vg0514785093:

Variant ID: vg0514785093 (JBrowse)Variation Type: SNP
Chromosome: chr05Position: 14785093
Reference Allele: AAlternative Allele: G
Primary Allele: ASecondary Allele: G

Inferred Ancestral Allele : A (evidence from allele frequency in Oryza rufipogon: A: 0.97, G: 0.03, others allele: 0.00, population size: 291. )

Flanking Sequence (100 bp) in Reference Genome:


GCCATCTGGATGCATCATCTCTGAGAAGACAGCCTTTTGTCCAGAGATGCTCATAGTTGAGCGGGATGATGGTTGCAACCTGGTCGTTAAAGGCGATGAT[A/G]
ACACGTTCAATGCTGTCTCTTCGCAGTTTTCCTCTGCACTCTCCTGCAGCTGTAGTGCAACCTCGAGGTTCCACAGGACATCACCCATGGATGGCCTGTT

Reverse complement sequence

AACAGGCCATCCATGGGTGATGTCCTGTGGAACCTCGAGGTTGCACTACAGCTGCAGGAGAGTGCAGAGGAAAACTGCGAAGAGACAGCATTGAACGTGT[T/C]
ATCATCGCCTTTAACGACCAGGTTGCAACCATCATCCCGCTCAACTATGAGCATCTCTGGACAAAAGGCTGTCTTCTCAGAGATGATGCATCCAGATGGC

Allele Frequencies:

Allele Effect: