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Detailed information for vg0514784977:

Variant ID: vg0514784977 (JBrowse)	Variation Type: SNP
Chromosome: chr05	Position: 14784977
Reference Allele: T	Alternative Allele: C
Primary Allele: T	Secondary Allele: C

Inferred Ancestral Allele : T (evidence from allele frequency in Oryza rufipogon: T: 0.98, C: 0.01, others allele: 0.00, population size: 291. )

Flanking Sequence (100 bp) in Reference Genome:

CTCACAGGACAGTCCGTTAACAATCAAATTAACTGTTATAAACTCCAACAATTTTCCCTATAAAACATGAGAACAGAAGCTTGAGAAGAATACTAAACGG[T/C]
AGTTTGGTCTTATCGGCCATCTGGATGCATCATCTCTGAGAAGACAGCCTTTTGTCCAGAGATGCTCATAGTTGAGCGGGATGATGGTTGCAACCTGGTC

Reverse complement sequence

GACCAGGTTGCAACCATCATCCCGCTCAACTATGAGCATCTCTGGACAAAAGGCTGTCTTCTCAGAGATGATGCATCCAGATGGCCGATAAGACCAAACT[A/G]
CCGTTTAGTATTCTTCTCAAGCTTCTGTTCTCATGTTTTATAGGGAAAATTGTTGGAGTTTATAACAGTTAATTTGATTGTTAACGGACTGTCCTGTGAG

Allele Frequencies:

Allele Effect: