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Detailed information for vg0514784976:

Variant ID: vg0514784976 (JBrowse)	Variation Type: SNP
Chromosome: chr05	Position: 14784976
Reference Allele: G	Alternative Allele: C
Primary Allele: G	Secondary Allele: C

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 0.99, C: 0.01, others allele: 0.00, population size: 291. )

Flanking Sequence (100 bp) in Reference Genome:

TCTCACAGGACAGTCCGTTAACAATCAAATTAACTGTTATAAACTCCAACAATTTTCCCTATAAAACATGAGAACAGAAGCTTGAGAAGAATACTAAACG[G/C]
TAGTTTGGTCTTATCGGCCATCTGGATGCATCATCTCTGAGAAGACAGCCTTTTGTCCAGAGATGCTCATAGTTGAGCGGGATGATGGTTGCAACCTGGT

Reverse complement sequence

ACCAGGTTGCAACCATCATCCCGCTCAACTATGAGCATCTCTGGACAAAAGGCTGTCTTCTCAGAGATGATGCATCCAGATGGCCGATAAGACCAAACTA[C/G]
CGTTTAGTATTCTTCTCAAGCTTCTGTTCTCATGTTTTATAGGGAAAATTGTTGGAGTTTATAACAGTTAATTTGATTGTTAACGGACTGTCCTGTGAGA

Allele Frequencies:

Allele Effect: