Search for Variation information by Variation ID:

Please input a variation ID (e.g., vg0722097923 , STR0500036000 ).

Detailed information for vg0514784816:

Variant ID: vg0514784816 (JBrowse)	Variation Type: SNP
Chromosome: chr05	Position: 14784816
Reference Allele: T	Alternative Allele: G
Primary Allele: T	Secondary Allele: G

Inferred Ancestral Allele : T (evidence from allele frequency in Oryza rufipogon: T: 1.00, others allele: 0.00, population size: 263. )

Flanking Sequence (100 bp) in Reference Genome:

TAGGACATCTTCAGAATCATGCATACAAATGGCGTCCTCGTTGTAGTACAGTAGTTACTAATTAGTCCGTGTACTACAGAAGATTATTCCAGTCTCTGGA[T/G]
TGTAAGGAAGGTAAACAAGAGTGTACGTGGGACACACAGATTAATCAACTGGTTCAGTATCTCACAGGACAGTCCGTTAACAATCAAATTAACTGTTATA

Reverse complement sequence

TATAACAGTTAATTTGATTGTTAACGGACTGTCCTGTGAGATACTGAACCAGTTGATTAATCTGTGTGTCCCACGTACACTCTTGTTTACCTTCCTTACA[A/C]
TCCAGAGACTGGAATAATCTTCTGTAGTACACGGACTAATTAGTAACTACTGTACTACAACGAGGACGCCATTTGTATGCATGATTCTGAAGATGTCCTA

Allele Frequencies:

Allele Effect: