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Detailed information for vg0430914376:

Variant ID: vg0430914376 (JBrowse)	Variation Type: SNP
Chromosome: chr04	Position: 30914376
Reference Allele: G	Alternative Allele: A
Primary Allele: G	Secondary Allele: A

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 1.00, others allele: 0.00, population size: 268. )

Flanking Sequence (100 bp) in Reference Genome:

CAACTTCTCCCATAACCAAAAGCTCCCTTAAATAGTCTATGTTTTGGTACAGATTCTGAGAAGTTGTAGATATAGAATCCAGAAAATGAACTATAAGCTC[G/A]
AAGGCAGAAGCTGAGAAACCCAACTTTTCTATATTCTCAGAAACTGGCTACCAATTAACTGCTTCTCAGAATCTCAAGCTTCACTAAACACGCCCAAAAT

Reverse complement sequence

ATTTTGGGCGTGTTTAGTGAAGCTTGAGATTCTGAGAAGCAGTTAATTGGTAGCCAGTTTCTGAGAATATAGAAAAGTTGGGTTTCTCAGCTTCTGCCTT[C/T]
GAGCTTATAGTTCATTTTCTGGATTCTATATCTACAACTTCTCAGAATCTGTACCAAAACATAGACTATTTAAGGGAGCTTTTGGTTATGGGAGAAGTTG

Allele Frequencies:

Allele Effect: