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Detailed information for vg0421624248:

Variant ID: vg0421624248 (JBrowse)	Variation Type: SNP
Chromosome: chr04	Position: 21624248
Reference Allele: G	Alternative Allele: A
Primary Allele: G	Secondary Allele: A

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 0.99, others allele: 0.00, population size: 345. )

Flanking Sequence (100 bp) in Reference Genome:

GTTGATGTTGCTTCATGGAGTTGCAGAGGCGGCACGATATTTTGCAGAGAATATATAGAGATTATGTGAGCAAAAAGTACATCCTTCAGCCAAAACCATC[G/A]
GAGCAGAGGCCAAGGAAAAATATCTAAAACGTATGGAGTTCTGATTTACTCTAGTCTGTAGCTATGTACACATCTTGAAATTAATACACGTAGTTTCTTT

Reverse complement sequence

AAAGAAACTACGTGTATTAATTTCAAGATGTGTACATAGCTACAGACTAGAGTAAATCAGAACTCCATACGTTTTAGATATTTTTCCTTGGCCTCTGCTC[C/T]
GATGGTTTTGGCTGAAGGATGTACTTTTTGCTCACATAATCTCTATATATTCTCTGCAAAATATCGTGCCGCCTCTGCAACTCCATGAAGCAACATCAAC

Allele Frequencies:

Allele Effect: