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Detailed information for vg0421623737:

Variant ID: vg0421623737 (JBrowse)Variation Type: SNP
Chromosome: chr04Position: 21623737
Reference Allele: AAlternative Allele: G
Primary Allele: ASecondary Allele: G

Inferred Ancestral Allele : A (evidence from allele frequency in Oryza rufipogon: A: 1.01, others allele: 0.00, population size: 322. )

Flanking Sequence (100 bp) in Reference Genome:


ATGAGCTCCGGCATAGTCTTTAAAGAATGCTTCTTGGTCCTCTGCGTATTTTTCTGCATAGACCTGAATGTGCGGTGAATTCTCAGACAGTTAGTTCAAT[A/G]
ATTATTTCAATTTTCAAATGATCCTGACATATCCTAGTACGAGATTGGTTTATTTCGGGAAGTGAGAGTACAGTTTAAGCATTATTCACCTTGAATGTTG

Reverse complement sequence

CAACATTCAAGGTGAATAATGCTTAAACTGTACTCTCACTTCCCGAAATAAACCAATCTCGTACTAGGATATGTCAGGATCATTTGAAAATTGAAATAAT[T/C]
ATTGAACTAACTGTCTGAGAATTCACCGCACATTCAGGTCTATGCAGAAAAATACGCAGAGGACCAAGAAGCATTCTTTAAAGACTATGCCGGAGCTCAT

Allele Frequencies:

Allele Effect: