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Detailed information for vg0332252566:

Variant ID: vg0332252566 (JBrowse)	Variation Type: SNP
Chromosome: chr03	Position: 32252566
Reference Allele: G	Alternative Allele: A
Primary Allele: G	Secondary Allele: A

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 0.99, A: 0.00, others allele: 0.00, population size: 295. )

Flanking Sequence (100 bp) in Reference Genome:

CCTTGGGAAGGGAACATGGGTGTAAGTTATAACAATCACCTGGGGGATTTGTGGACCGCTATGAAAGGGTGGTTGCTGTAGATGAGGTTGCTGGAGAGGA[G/A]
CAGGTGCTGGTTCCTGCAACTGTTTTGGAGTTCAAATTTGCAAGTTATAAGAAGAACAAAATTGACACTTCTCTTCAGCCATTCATCAATGTAGTCAATG

Reverse complement sequence

CATTGACTACATTGATGAATGGCTGAAGAGAAGTGTCAATTTTGTTCTTCTTATAACTTGCAAATTTGAACTCCAAAACAGTTGCAGGAACCAGCACCTG[C/T]
TCCTCTCCAGCAACCTCATCTACAGCAACCACCCTTTCATAGCGGTCCACAAATCCCCCAGGTGATTGTTATAACTTACACCCATGTTCCCTTCCCAAGG

Allele Frequencies:

Allele Effect: