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Detailed information for vg0332250894:

Variant ID: vg0332250894 (JBrowse)	Variation Type: SNP
Chromosome: chr03	Position: 32250894
Reference Allele: G	Alternative Allele: T
Primary Allele: T	Secondary Allele: G

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 1.00, T: 0.01, others allele: 0.00, population size: 277. )

Flanking Sequence (100 bp) in Reference Genome:

AACTAAATCTGTGATTCCATGACTGGTGCAACAGTTGCTTCAAATAGTCAATTAGGAAACAAAACCCTGCATATGTAAGTGAGTAGTAATTGAGTATATT[G/T]
CCATGGCTGTGTTCTTTGATGAAGGACATAGAAGCTTTTGAGCATTGAAATGTTGTGTATCCAACTCAAACATACAAAAACCATACATATGTTTGGGTTA

Reverse complement sequence

TAACCCAAACATATGTATGGTTTTTGTATGTTTGAGTTGGATACACAACATTTCAATGCTCAAAAGCTTCTATGTCCTTCATCAAAGAACACAGCCATGG[C/A]
AATATACTCAATTACTACTCACTTACATATGCAGGGTTTTGTTTCCTAATTGACTATTTGAAGCAACTGTTGCACCAGTCATGGAATCACAGATTTAGTT

Allele Frequencies:

Allele Effect: