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Detailed information for vg0332250851:

Variant ID: vg0332250851 (JBrowse)	Variation Type: INDEL
Chromosome: chr03	Position: 32250851
Reference Allele: A	Alternative Allele: AACAAAACCCTGCAT
Primary Allele: AACAAAACCCTGCAT	Secondary Allele: A

Inferred Ancestral Allele : A (evidence from allele frequency in Oryza rufipogon: A: 1.00, others allele: 0.00, population size: 304. )

Flanking Sequence (100 bp) in Reference Genome:

GCATTATCAGAAGTTTTTTTTATAAAAAAAGTCAAGAGTATGGAACTAAATCTGTGATTCCATGACTGGTGCAACAGTTGCTTCAAATAGTCAATTAGGA[A/AACAAAACCCTGCAT]
ACAAAACCCTGCATATGTAAGTGAGTAGTAATTGAGTATATTGCCATGGCTGTGTTCTTTGATGAAGGACATAGAAGCTTTTGAGCATTGAAATGTTGTG

Reverse complement sequence

CACAACATTTCAATGCTCAAAAGCTTCTATGTCCTTCATCAAAGAACACAGCCATGGCAATATACTCAATTACTACTCACTTACATATGCAGGGTTTTGT[T/ATGCAGGGTTTTGTT]
TCCTAATTGACTATTTGAAGCAACTGTTGCACCAGTCATGGAATCACAGATTTAGTTCCATACTCTTGACTTTTTTTATAAAAAAAACTTCTGATAATGC

Allele Frequencies:

Allele Effect: