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Detailed information for vg0332250629:

Variant ID: vg0332250629 (JBrowse)	Variation Type: SNP
Chromosome: chr03	Position: 32250629
Reference Allele: T	Alternative Allele: G
Primary Allele: G	Secondary Allele: T

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 0.99, others allele: 0.00, population size: 277. )

Flanking Sequence (100 bp) in Reference Genome:

TGAGTTCTCTGAAAAAATTAATAATTGAAGTATTGAACCTGTATAAACTATCATGCGAGCATTAGTGCCAGGGACAGTTCCATGCAATTGCTGATCTAAT[T/G]
GCTTGTTCACCTTTTTCAATCATTTCAACTTGTGATAGTGAACCATAATTCTGATTTTTATGTGGAATACATTGAATACAAATCTACCAAGTTTCTTCAA

Reverse complement sequence

TTGAAGAAACTTGGTAGATTTGTATTCAATGTATTCCACATAAAAATCAGAATTATGGTTCACTATCACAAGTTGAAATGATTGAAAAAGGTGAACAAGC[A/C]
ATTAGATCAGCAATTGCATGGAACTGTCCCTGGCACTAATGCTCGCATGATAGTTTATACAGGTTCAATACTTCAATTATTAATTTTTTCAGAGAACTCA

Allele Frequencies:

Allele Effect: