Search for Variation information by Variation ID:

Please input a variation ID (e.g., vg0722097923 , STR0500036000 ).

Detailed information for vg0234907968:

Variant ID: vg0234907968 (JBrowse)	Variation Type: INDEL
Chromosome: chr02	Position: 34907968
Reference Allele: AT	Alternative Allele: A
Primary Allele: AT	Secondary Allele: A

Inferred Ancestral Allele : AT (evidence from allele frequency in Oryza rufipogon: AT: 1.00, others allele: 0.00, population size: 254. )

Flanking Sequence (100 bp) in Reference Genome:

ATGGCTACTGCCACTACTGAATTGTCAGTTGAGTTCTTTGAACATGGAATGTGTAGAGACATTGAATCCTTTCAGAAATCTCACCTAGAATGAAAAAAAA[AT/A]
AAGCATGCTTGGAAACATACGAGCAATTTGAAGTTTGAGAAAGAGGGTAGTTTTAAGTTATGGCTATCAAATAACTTACAGTTCTTTCATTAAAAAAAAC

Reverse complement sequence

GTTTTTTTTAATGAAAGAACTGTAAGTTATTTGATAGCCATAACTTAAAACTACCCTCTTTCTCAAACTTCAAATTGCTCGTATGTTTCCAAGCATGCTT[AT/T]
TTTTTTTTCATTCTAGGTGAGATTTCTGAAAGGATTCAATGTCTCTACACATTCCATGTTCAAAGAACTCAACTGACAATTCAGTAGTGGCAGTAGCCAT

Allele Frequencies:

Allele Effect: