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Detailed information for vg0234906196:

Variant ID: vg0234906196 (JBrowse)	Variation Type: SNP
Chromosome: chr02	Position: 34906196
Reference Allele: G	Alternative Allele: A
Primary Allele: G	Secondary Allele: A

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 1.00, others allele: 0.00, population size: 263. )

Flanking Sequence (100 bp) in Reference Genome:

GGGTAAAGAGAAGTATATTTGAAGAAGCAAAAAAAAAGAGGGGCGGGGAGGGGCACGATTGAGGCATGAATGGAACATAATTTTGCAGAATTAAACCACT[G/A]
CTCAAACAGAAACAAAGAAAATGAATGCATTAAAGACTTGAATAGAACAAGTCCCGCCTATTACAGTGATTCCCAAAGAAACACACTGAAGGATAGAAGG

Reverse complement sequence

CCTTCTATCCTTCAGTGTGTTTCTTTGGGAATCACTGTAATAGGCGGGACTTGTTCTATTCAAGTCTTTAATGCATTCATTTTCTTTGTTTCTGTTTGAG[C/T]
AGTGGTTTAATTCTGCAAAATTATGTTCCATTCATGCCTCAATCGTGCCCCTCCCCGCCCCTCTTTTTTTTTGCTTCTTCAAATATACTTCTCTTTACCC

Allele Frequencies:

Allele Effect: