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Detailed information for vg0213361551:

Variant ID: vg0213361551 (JBrowse)	Variation Type: INDEL
Chromosome: chr02	Position: 13361551
Reference Allele: C	Alternative Allele: CA
Primary Allele: C	Secondary Allele: CA

Inferred Ancestral Allele : C (evidence from allele frequency in Oryza rufipogon: C: 1.00, others allele: 0.00, population size: 309. )

Flanking Sequence (100 bp) in Reference Genome:

CACAATATTAATCTAAAGTGGTCATATTGCTAAACTATGCACACACCTGCAGTTGAAGTGGCAGCCACGAAAGGATCTACCAATCTTAAAATCTGGAGAC[C/CA]
AATATCTTTCATGGAATTCCCTCAAGGAAAGGGTTCCACTATTAGACTGGAAAAAGGGAAACATATCAAATCATGAAAAAGGCATAATCTGAAATTGGAA

Reverse complement sequence

TTCCAATTTCAGATTATGCCTTTTTCATGATTTGATATGTTTCCCTTTTTCCAGTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATT[G/TG]
GTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGGTGTGTGCATAGTTTAGCAATATGACCACTTTAGATTAATATTGTG

Allele Frequencies:

Allele Effect: