ATCAGTTCAAAACAGAGTCTTCCCACATCGGTATCACAAATCACACAAAGTTCATCAATTATCGAAGTTTCATATACTCTTTAGTTTGTACCGTCCTTTC[AAA/AAAA]
AAAACATTGAAAGGAAGATCGTCTTCATTATGGCCGGCAAACGTAGACATGTTGACAGACGACATGCATGCATTCCTTTTTTTTCAGGTTTAGAGTAACT
AGTTACTCTAAACCTGAAAAAAAAGGAATGCATGCATGTCGTCTGTCAACATGTCTACGTTTGCCGGCCATAATGAAGACGATCTTCCTTTCAATGTTTT[TTT/TTTT]
GAAAGGACGGTACAAACTAAAGAGTATATGAAACTTCGATAATTGATGAACTTTGTGTGATTTGTGATACCGATGTGGGAAGACTCTGTTTTGAACTGAT
| Populations | Population Size | Frequency of AAA(primary allele) | Frequency of AAAA(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 60.60% | 35.20% | 6.46% | 0.00% | NA |
| All Indica | 492 | 47.40% | 48.80% | 7.32% | 0.00% | NA |
| All Japonica | 244 | 93.00% | 1.70% | 5.33% | 0.00% | NA |
| Aus | 7 | 57.10% | 42.90% | 0.00% | 0.00% | NA |
| Indica I | 492 | 47.40% | 48.80% | 7.32% | 0.00% | NA |
| Indica II | 215 | 20.50% | 72.10% | 9.30% | 0.00% | NA |
| Indica III | 21 | 38.90% | 52.40% | 14.29% | 0.00% | NA |
| Indica Intermediate | 190 | 53.70% | 43.00% | 5.79% | 0.00% | NA |
| Temperate Japonica | 189 | 93.10% | 2.20% | 4.76% | 0.00% | NA |
| Tropical Japonica | 36 | 91.70% | 0.00% | 8.33% | 0.00% | NA |
| Japonica Intermediate | 19 | 94.70% | 0.00% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 11.10% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 58.00% | 38.50% | 5.63% | 0.00% | NA |