AAAGCATATCACTTCATTTGTGACAGTGTGAGATACCTTCACAGTGTTAGGATATGCTATGTAGTCCTATATTTGCAAATAACCAACAAGCAGAGAAACA[TT/TTT]
TTTTTCCCTCCGAAAAATTGTGCCAAAACTCATGTATATCACTTATTTTTCCTTCCAAATGTGCTGTTTCTCACCAACATATGGAGAATTCTGAAATCAA
TTGATTTCAGAATTCTCCATATGTTGGTGAGAAACAGCACATTTGGAAGGAAAAATAAGTGATATACATGAGTTTTGGCACAATTTTTCGGAGGGAAAAA[AA/AAA]
TGTTTCTCTGCTTGTTGGTTATTTGCAAATATAGGACTACATAGCATATCCTAACACTGTGAAGGTATCTCACACTGTCACAAATGAAGTGATATGCTTT
| Populations | Population Size | Frequency of TTT(primary allele) | Frequency of TT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 65.80% | 32.30% | 2.84% | 0.00% | NA |
| All Indica | 492 | 94.50% | 3.10% | 2.44% | 0.00% | NA |
| All Japonica | 244 | 8.10% | 88.90% | 3.28% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 94.50% | 3.10% | 2.44% | 0.00% | NA |
| Indica II | 215 | 94.90% | 2.40% | 2.79% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 95.30% | 2.20% | 2.63% | 0.00% | NA |
| Temperate Japonica | 189 | 9.80% | 87.30% | 3.17% | 0.00% | NA |
| Tropical Japonica | 36 | 2.90% | 91.70% | 5.56% | 0.00% | NA |
| Japonica Intermediate | 19 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 11.10% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 82.70% | 14.70% | 3.03% | 0.00% | NA |