AGGGCAACGGCAAATCACGAGCCACACGCGCATCGCAAGACCAACGCTGAGTTATCGCATCTCGGCATCCGCATCCGCGCGACGACGACGACGAGGAGGA[CGACGCCGACGCCG/CGACGCCGACGCCGACGCCG]
GAGGCCGTCCGGGGCAAGGGGAATGCGGAGCGATGAGGCGGGCACGAGGCACTGACGCCGCCGTCCAGCGCAAGCTGCGCGGCGGCCGCACCTGCCACCG
CGGTGGCAGGTGCGGCCGCCGCGCAGCTTGCGCTGGACGGCGGCGTCAGTGCCTCGTGCCCGCCTCATCGCTCCGCATTCCCCTTGCCCCGGACGGCCTC[CGGCGTCGGCGTCG/CGGCGTCGGCGTCGGCGTCG]
TCCTCCTCGTCGTCGTCGTCGCGCGGATGCGGATGCCGAGATGCGATAACTCAGCGTTGGTCTTGCGATGCGCGTGTGGCTCGTGATTTGCCGTTGCCCT
| Populations | Population Size | Frequency of CGACGCCGACGCCGACGCCG(primary allele) | Frequency of CGACGCCGACGCCG(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 69.30% | 26.60% | 5.68% | 0.00% | NA |
| All Indica | 492 | 94.30% | 1.30% | 4.47% | 0.00% | NA |
| All Japonica | 244 | 20.40% | 73.40% | 7.79% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 94.30% | 1.30% | 4.47% | 0.00% | NA |
| Indica II | 215 | 96.30% | 1.40% | 2.33% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 90.50% | 1.70% | 7.89% | 0.00% | NA |
| Temperate Japonica | 189 | 3.40% | 89.40% | 7.41% | 0.00% | NA |
| Tropical Japonica | 36 | 88.90% | 8.60% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 42.10% | 46.70% | 21.05% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Intermediate | 231 | 83.10% | 9.00% | 8.66% | 0.00% | NA |