ATACGAAACCCAGTAGTCATTCACAACAATAGTTTGGGAAAAATGCATTCGAGAGCAAATAATCTTTTCTAGTTCAACAAGATATAAAGATAGTTTCCCA[TTTT/TTTTT]
TTTCCCAAAATTTGGAGGGGTGTTTGGGGAGAGAGGAAGAAGGGTGGCTTAGGGTAACTCACAGCATCCATTAGTATTTGGACATCTGCATCAGCCATTT
AAATGGCTGATGCAGATGTCCAAATACTAATGGATGCTGTGAGTTACCCTAAGCCACCCTTCTTCCTCTCTCCCCAAACACCCCTCCAAATTTTGGGAAA[AAAA/AAAAA]
TGGGAAACTATCTTTATATCTTGTTGAACTAGAAAAGATTATTTGCTCTCGAATGCATTTTTCCCAAACTATTGTTGTGAATGACTACTGGGTTTCGTAT
| Populations | Population Size | Frequency of TTTT(primary allele) | Frequency of TTTTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 88.50% | 9.70% | 1.94% | 0.00% | NA |
| All Indica | 492 | 98.60% | 0.80% | 0.61% | 0.00% | NA |
| All Japonica | 244 | 66.80% | 29.70% | 4.92% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 98.60% | 0.80% | 0.61% | 0.00% | NA |
| Indica II | 215 | 98.10% | 1.40% | 0.47% | 0.00% | NA |
| Indica III | 21 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 98.90% | 0.50% | 0.53% | 0.00% | NA |
| Temperate Japonica | 189 | 61.40% | 35.20% | 5.29% | 0.00% | NA |
| Tropical Japonica | 36 | 94.40% | 2.90% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 68.40% | 27.80% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 96.10% | 3.10% | 0.87% | 0.00% | NA |