AGTGGAGAGATTGCATGAACAATTTGTAAGCAGGGTACCCTGAGTTGTTTATAGAAATATAAATAGGTAATCCATCCATTATCTCTATTGTTTCGTCATC[TT/TTT]
TTTTTGACTCATTCATGTCTGATTAATCCCCCTGCTTATAGGATTTTGTGGGACGATCAGTCTAGCTTTGTACTATATCATACTGTATACTTATATATCA
TGATATATAAGTATACAGTATGATATAGTACAAAGCTAGACTGATCGTCCCACAAAATCCTATAAGCAGGGGGATTAATCAGACATGAATGAGTCAAAAA[AA/AAA]
GATGACGAAACAATAGAGATAATGGATGGATTACCTATTTATATTTCTATAAACAACTCAGGGTACCCTGCTTACAAATTGTTCATGCAATCTCTCCACT
| Populations | Population Size | Frequency of TT(primary allele) | Frequency of TTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 94.80% | 4.40% | 0.78% | 0.00% | NA |
| All Indica | 492 | 92.50% | 6.40% | 1.22% | 0.00% | NA |
| All Japonica | 244 | 99.20% | 0.80% | 0.00% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 92.50% | 6.40% | 1.22% | 0.00% | NA |
| Indica II | 215 | 95.80% | 3.30% | 0.93% | 0.00% | NA |
| Indica III | 21 | 81.00% | 19.00% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 88.90% | 10.10% | 1.05% | 0.00% | NA |
| Temperate Japonica | 189 | 98.90% | 1.10% | 0.00% | 0.00% | NA |
| Tropical Japonica | 36 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 90.50% | 8.70% | 0.87% | 0.00% | NA |