GGATCGGGCCAACGAATAGGCCCAAACAATCCTGTGTCCCACGATTTTCCGACCGATGGATTTGCTCCGAGATTCACGCCAAAAACCACGCGAGTCAAAC[AA/A]
AAAACTCAAAAAACTCTTTCGTCTTCCTCCTCGCGACTCCTCGCGCTCACCGCCATTGACGGCCACCTTTACCTCGGAAAAGGATTTGATCCCCGCTAAA
TTTAGCGGGGATCAAATCCTTTTCCGAGGTAAAGGTGGCCGTCAATGGCGGTGAGCGCGAGGAGTCGCGAGGAGGAAGACGAAAGAGTTTTTTGAGTTTT[TT/T]
GTTTGACTCGCGTGGTTTTTGGCGTGAATCTCGGAGCAAATCCATCGGTCGGAAAATCGTGGGACACAGGATTGTTTGGGCCTATTCGTTGGCCCGATCC
| Populations | Population Size | Frequency of AA(primary allele) | Frequency of A(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 49.60% | 47.50% | 5.56% | 0.00% | NA |
| All Indica | 492 | 28.70% | 66.70% | 6.50% | 0.00% | NA |
| All Japonica | 244 | 96.30% | 0.40% | 3.28% | 0.00% | NA |
| Aus | 7 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 28.70% | 66.70% | 6.50% | 0.00% | NA |
| Indica II | 215 | 27.90% | 67.40% | 6.51% | 0.00% | NA |
| Indica III | 21 | 0.00% | 47.60% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 29.40% | 65.80% | 6.84% | 0.00% | NA |
| Temperate Japonica | 189 | 96.80% | 0.00% | 3.17% | 0.00% | NA |
| Tropical Japonica | 36 | 91.70% | 2.90% | 5.56% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 37.50% | 55.60% | 11.11% | 0.00% | NA |
| Intermediate | 231 | 39.40% | 56.70% | 6.49% | 0.00% | NA |