TCATTTTTTATTTCTCAAAGTATAGATCGAGTTTCAATTTGATTTTTGTTGGGGTGATAGATATTTCATATTAATATACTCTACATTGTAGAAAAGCAGA[TTTTT/TTTTC]
TTTCACAACCATTTACATTAAATCTAAAGAAAGATCCCCGCAAAATTAAATCTAAAAGAAAGATGTACAGAGGGGACATCTCTGGATTAGAATCCATTCC
GGAATGGATTCTAATCCAGAGATGTCCCCTCTGTACATCTTTCTTTTAGATTTAATTTTGCGGGGATCTTTCTTTAGATTTAATGTAAATGGTTGTGAAA[AAAAA/GAAAA]
TCTGCTTTTCTACAATGTAGAGTATATTAATATGAAATATCTATCACCCCAACAAAAATCAAATTGAAACTCGATCTATACTTTGAGAAATAAAAAATGA
| Populations | Population Size | Frequency of TTTTT(primary allele) | Frequency of TTTTC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 93.90% | 1.50% | 4.65% | 0.00% | NA |
| All Indica | 492 | 94.10% | 0.40% | 5.49% | 0.00% | NA |
| All Japonica | 244 | 97.10% | 0.00% | 2.87% | 0.00% | NA |
| Aus | 7 | 40.00% | 42.90% | 28.57% | 0.00% | NA |
| Indica I | 492 | 94.10% | 0.40% | 5.49% | 0.00% | NA |
| Indica II | 215 | 96.30% | 0.00% | 3.72% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 90.50% | 1.10% | 8.42% | 0.00% | NA |
| Temperate Japonica | 189 | 97.40% | 0.00% | 2.65% | 0.00% | NA |
| Tropical Japonica | 36 | 94.40% | 0.00% | 5.56% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 33.30% | 66.70% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 92.20% | 0.90% | 6.93% | 0.00% | NA |