AACCATGCATACACGTATTATATACTCAGTTATATACTAGATGAAGAATTAATGTGGTCGTCATCCAAGATATCCACAGTACAGTACACTACAGTCAGTT[ATTAATTAATTAAT/ATTAATTAAT]
CAAAAATGAAAGTGTAGTGTTGTCACCTAGAAAAAATGTGCCGAAAATATTTTGGTGGAGACGGGGCCCTCAAGTTTAATACAAAGCAGTAAGTCTATTT
AAATAGACTTACTGCTTTGTATTAAACTTGAGGGCCCCGTCTCCACCAAAATATTTTCGGCACATTTTTTCTAGGTGACAACACTACACTTTCATTTTTG[ATTAATTAATTAAT/ATTAATTAAT]
AACTGACTGTAGTGTACTGTACTGTGGATATCTTGGATGACGACCACATTAATTCTTCATCTAGTATATAACTGAGTATATAATACGTGTATGCATGGTT
| Populations | Population Size | Frequency of ATTAATTAAT(primary allele) | Frequency of ATTAATTAATTAAT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 65.00% | 32.30% | 4.01% | 0.00% | NA |
| All Indica | 492 | 97.20% | 0.80% | 2.03% | 0.00% | NA |
| All Japonica | 244 | 1.80% | 91.40% | 6.97% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 97.20% | 0.80% | 2.03% | 0.00% | NA |
| Indica II | 215 | 96.70% | 1.00% | 2.33% | 0.00% | NA |
| Indica III | 21 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 96.80% | 1.10% | 2.11% | 0.00% | NA |
| Temperate Japonica | 189 | 1.70% | 91.50% | 6.88% | 0.00% | NA |
| Tropical Japonica | 36 | 3.00% | 88.90% | 8.33% | 0.00% | NA |
| Japonica Intermediate | 19 | 0.00% | 94.70% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 11.10% | 88.90% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 85.30% | 11.30% | 3.90% | 0.00% | NA |