ACGACCTGGGATTGTAATCCGGACCTACTTTTTTTTTTGTCCAACTTTTTGTGCGTATTAGCCGATTAACCCACGGTAATCCTAGTCCCAACATTACTTC[TTTT/TT,TTT,TTTTT]
TTTTTTTAGAAACACATTACTTGGTTTGGCCCCGTGAGTTACTTTTGGTTTATCTTTATTCGTTTCATTTACGCTCTGAACTCTACGTGTCTGTTACGAA
TTCGTAACAGACACGTAGAGTTCAGAGCGTAAATGAAACGAATAAAGATAAACCAAAAGTAACTCACGGGGCCAAACCAAGTAATGTGTTTCTAAAAAAA[AAAA/AA,AAA,AAAAA]
GAAGTAATGTTGGGACTAGGATTACCGTGGGTTAATCGGCTAATACGCACAAAAAGTTGGACAAAAAAAAAAGTAGGTCCGGATTACAATCCCAGGTCGT
| Populations | Population Size | Frequency of TT(primary allele) | Frequency of TTTTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 55.20% | 4.40% | 9.30% | 0.00% | NA |
| All Indica | 492 | 81.90% | 0.00% | 9.35% | 0.00% | NA; TTTT: 2.70% |
| All Japonica | 244 | 4.90% | 0.00% | 8.61% | 0.00% | NA; TT: 43.90% |
| Aus | 7 | 14.30% | 0.00% | 0.00% | 0.00% | NA; TT: 85.70% |
| Indica I | 492 | 81.90% | 0.00% | 9.35% | 0.00% | NA; TTTT: 2.70% |
| Indica II | 215 | 83.30% | 0.00% | 7.44% | 0.00% | NA; TTTT: 2.00% |
| Indica III | 21 | 66.70% | 0.00% | 4.76% | 0.00% | NA; TTTT: 5.00% |
| Indica Intermediate | 190 | 74.70% | 0.00% | 13.68% | 0.00% | NA; TTTT: 4.90% |
| Temperate Japonica | 189 | 4.70% | 0.00% | 8.99% | 0.00% | NA; TT: 55.60% |
| Tropical Japonica | 36 | 3.00% | 0.00% | 8.33% | 0.00% | NA; TT: 88.90% |
| Japonica Intermediate | 19 | 11.10% | 0.00% | 5.26% | 0.00% | NA; TT: 73.70% |
| VI/Aromatic | 9 | 0.00% | 0.00% | 0.00% | 0.00% | NA; TTTT: 0.00%; TTTT: 100.00% |
| Intermediate | 231 | 67.50% | 0.00% | 13.85% | 0.00% | NA; TTTT: 6.50% |