TGCGGCCTGCGGGCAGCGGGCGTGCATGGCACGGTGCGGACATCTTGTGATGATTGTCCTTTCTGCTGGAAAACGACCTGGGATTGTAATCCGGACCTAC[TTT/TT]
TTTTTTTGTCCAACTTTTTGTGCGTATTAGCCGATTAACCCACGGTAATCCTAGTCCCAACATTACTTCTTTTTTTTTTTAGAAACACATTACTTGGTTT
AAACCAAGTAATGTGTTTCTAAAAAAAAAAAGAAGTAATGTTGGGACTAGGATTACCGTGGGTTAATCGGCTAATACGCACAAAAAGTTGGACAAAAAAA[AAA/AA]
GTAGGTCCGGATTACAATCCCAGGTCGTTTTCCAGCAGAAAGGACAATCATCACAAGATGTCCGCACCGTGCCATGCACGCCCGCTGCCCGCAGGCCGCA
| Populations | Population Size | Frequency of TTT(primary allele) | Frequency of TT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 85.70% | 8.70% | 6.20% | 0.00% | NA |
| All Indica | 492 | 83.30% | 10.50% | 6.91% | 0.00% | NA |
| All Japonica | 244 | 96.30% | 0.00% | 3.69% | 0.00% | NA |
| Aus | 7 | 20.00% | 57.10% | 28.57% | 0.00% | NA |
| Indica I | 492 | 83.30% | 10.50% | 6.91% | 0.00% | NA |
| Indica II | 215 | 84.20% | 10.00% | 6.51% | 0.00% | NA |
| Indica III | 21 | 61.90% | 31.60% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 77.40% | 15.50% | 8.42% | 0.00% | NA |
| Temperate Japonica | 189 | 97.90% | 0.00% | 2.12% | 0.00% | NA |
| Tropical Japonica | 36 | 86.10% | 0.00% | 13.89% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 79.20% | 13.70% | 8.23% | 0.00% | NA |