GCGGCGGCCAGCTCCAGCAGCAGGATCGGAGCAGCGGAGGAGGAAGCCATTGTTGCACTTGCACCGACGGAGGAGATCATGGGAGGCAGGTGAGGTGGGG[GG/GA]
GAGAGAGGCAAGACGACGGCTTTGAGATGGGCGCTAAAGCCGAGGTGGTAAGGTAGGCTTTGAGTGGGAGCAGTGGAATGTGAGCTGTGGTCAGAGTGTG
CACACTCTGACCACAGCTCACATTCCACTGCTCCCACTCAAAGCCTACCTTACCACCTCGGCTTTAGCGCCCATCTCAAAGCCGTCGTCTTGCCTCTCTC[CC/TC]
CCCCACCTCACCTGCCTCCCATGATCTCCTCCGTCGGTGCAAGTGCAACAATGGCTTCCTCCTCCGCTGCTCCGATCCTGCTGCTGGAGCTGGCCGCCGC
| Populations | Population Size | Frequency of GA(primary allele) | Frequency of GG(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 59.00% | 36.00% | 7.75% | 0.00% | NA |
| All Indica | 492 | 90.20% | 2.40% | 7.52% | 0.00% | NA |
| All Japonica | 244 | 1.30% | 90.20% | 8.61% | 0.00% | NA |
| Aus | 7 | 71.40% | 28.60% | 0.00% | 0.00% | NA |
| Indica I | 492 | 90.20% | 2.40% | 7.52% | 0.00% | NA |
| Indica II | 215 | 93.50% | 0.50% | 6.05% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 83.70% | 5.90% | 11.05% | 0.00% | NA |
| Temperate Japonica | 189 | 0.00% | 92.10% | 7.94% | 0.00% | NA |
| Tropical Japonica | 36 | 10.00% | 75.00% | 16.67% | 0.00% | NA |
| Japonica Intermediate | 19 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 71.00% | 21.20% | 9.96% | 0.00% | NA |