GAAAACAAAAGTGCGTGGGTAGAGAGAGAGATGGGAGCGTAAGCGTAACGGATGCGGCGGAAGCAGTGGGACGAGCGACGGCGACCCTGCTCGCTCGCTC[GCTGGCTGG/G]
TGCGACGGATGGGGATCGGCGCAGGCGGCGGTGGCGGAGGACGTGCTCACCAGGATGGATGCGGCGGAAGCAGCTGGACGAACGACGGCGCCCCCTGCTC
GAGCAGGGGGCGCCGTCGTTCGTCCAGCTGCTTCCGCCGCATCCATCCTGGTGAGCACGTCCTCCGCCACCGCCGCCTGCGCCGATCCCCATCCGTCGCA[CCAGCCAGC/C]
GAGCGAGCGAGCAGGGTCGCCGTCGCTCGTCCCACTGCTTCCGCCGCATCCGTTACGCTTACGCTCCCATCTCTCTCTCTACCCACGCACTTTTGTTTTC
| Populations | Population Size | Frequency of GCTGGCTGG(primary allele) | Frequency of G(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 65.60% | 29.40% | 6.98% | 0.00% | NA |
| All Indica | 492 | 49.80% | 45.20% | 9.15% | 0.00% | NA |
| All Japonica | 244 | 94.70% | 2.50% | 2.87% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 49.80% | 45.20% | 9.15% | 0.00% | NA |
| Indica II | 215 | 60.00% | 35.80% | 6.51% | 0.00% | NA |
| Indica III | 21 | 85.70% | 14.30% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 51.60% | 42.40% | 10.53% | 0.00% | NA |
| Temperate Japonica | 189 | 95.20% | 2.20% | 2.65% | 0.00% | NA |
| Tropical Japonica | 36 | 97.20% | 0.00% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 84.20% | 11.10% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 56.70% | 37.30% | 9.52% | 0.00% | NA |