ATCCGTGCGGCCTGCCAAGCACCTGCGGCGCCTACGCCGTCTGCGTGCCGCCCAGCGGCCGGTGCGCGTGCCTGGCCAACGCGACGGACGGCTCGGGATG[CGCCGCCG/CGCCGCCC]
CAAACGTCGGCGGCGGCGGCGGCCTCTGCGGCCGCACGGGCGGCGAGGTGGGCGGGCTGTACTGGGAGGTGCGGAGGCAGCGCGTGGAGCCGGCGAACAA
TTGTTCGCCGGCTCCACGCGCTGCCTCCGCACCTCCCAGTACAGCCCGCCCACCTCGCCGCCCGTGCGGCCGCAGAGGCCGCCGCCGCCGCCGACGTTTG[CGGCGGCG/GGGCGGCG]
CATCCCGAGCCGTCCGTCGCGTTGGCCAGGCACGCGCACCGGCCGCTGGGCGGCACGCAGACGGCGTAGGCGCCGCAGGTGCTTGGCAGGCCGCACGGAT
| Populations | Population Size | Frequency of CGCCGCCG(primary allele) | Frequency of CGCCGCCC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 47.80% | 39.00% | 21.58% | 0.00% | NA |
| All Indica | 492 | 41.70% | 44.10% | 24.39% | 0.00% | NA |
| All Japonica | 244 | 79.10% | 6.80% | 15.16% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 41.70% | 44.10% | 24.39% | 0.00% | NA |
| Indica II | 215 | 40.90% | 45.10% | 23.72% | 0.00% | NA |
| Indica III | 21 | 47.10% | 42.90% | 19.05% | 0.00% | NA |
| Indica Intermediate | 190 | 45.40% | 40.50% | 25.79% | 0.00% | NA |
| Temperate Japonica | 189 | 80.40% | 6.20% | 14.29% | 0.00% | NA |
| Tropical Japonica | 36 | 80.60% | 0.00% | 19.44% | 0.00% | NA |
| Japonica Intermediate | 19 | 63.20% | 25.00% | 15.79% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 48.80% | 37.70% | 26.41% | 0.00% | NA |