CGAGGCGAGGGGAGAGAGCGCGTGAGAGGTTTTTGGGGTGTAGCGATGCGCGGAACGGAGGAGATGGGTAGGGAGGAGGCTTGGTTTTATATTGGGCACT[CCTCCCTCC/CCTCCCTCCCT]
CACACACTGCGTTAATTACCCGTTTCGACCAATTTATTTACCGTGGTTAATTACTTCAGAGGAAAAAAAAAAGGTGGGTTTAGATAGATCAGGGTGACGT
ACGTCACCCTGATCTATCTAAACCCACCTTTTTTTTTTCCTCTGAAGTAATTAACCACGGTAAATAAATTGGTCGAAACGGGTAATTAACGCAGTGTGTG[GGAGGGAGG/AGGGAGGGAGG]
AGTGCCCAATATAAAACCAAGCCTCCTCCCTACCCATCTCCTCCGTTCCGCGCATCGCTACACCCCAAAAACCTCTCACGCGCTCTCTCCCCTCGCCTCG
| Populations | Population Size | Frequency of CCTCCCTCC(primary allele) | Frequency of CCTCCCTCCCT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 94.70% | 2.40% | 2.97% | 0.00% | NA |
| All Indica | 492 | 92.50% | 3.40% | 4.27% | 0.00% | NA |
| All Japonica | 244 | 98.80% | 0.40% | 0.82% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 92.50% | 3.40% | 4.27% | 0.00% | NA |
| Indica II | 215 | 93.50% | 2.90% | 3.72% | 0.00% | NA |
| Indica III | 21 | 76.20% | 15.80% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 89.50% | 5.60% | 5.26% | 0.00% | NA |
| Temperate Japonica | 189 | 99.50% | 0.00% | 0.53% | 0.00% | NA |
| Tropical Japonica | 36 | 94.40% | 2.90% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 11.10% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 91.30% | 4.50% | 4.33% | 0.00% | NA |