CGCCGGCTTCCGCGGTGGACCACCTCGGCCGTCCGGCCTCCCGCCGCACCTCCGGCCGGTGGCTCGCCGCCCTCTTCATCATCGGTACCTCCAAAAAACT[C/CC]
CCCCCGAGAAACCAGGGCGGCGGCGGCGGCGGCGGCGAGTCAACGAGCAAGCGCCGCCGCGCTCTCACCGCACTCTCTCTCTCTCTCTCTCCCGAACTAA
TTAGTTCGGGAGAGAGAGAGAGAGAGAGTGCGGTGAGAGCGCGGCGGCGCTTGCTCGTTGACTCGCCGCCGCCGCCGCCGCCGCCCTGGTTTCTCGGGGG[G/GG]
AGTTTTTTGGAGGTACCGATGATGAAGAGGGCGGCGAGCCACCGGCCGGAGGTGCGGCGGGAGGCCGGACGGCCGAGGTGGTCCACCGCGGAAGCCGGCG
| Populations | Population Size | Frequency of C(primary allele) | Frequency of CC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 93.80% | 1.00% | 5.30% | 0.00% | NA |
| All Indica | 492 | 93.70% | 0.90% | 5.49% | 0.00% | NA |
| All Japonica | 244 | 95.10% | 0.00% | 4.92% | 0.00% | NA |
| Aus | 7 | 42.90% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 93.70% | 0.90% | 5.49% | 0.00% | NA |
| Indica II | 215 | 93.50% | 0.50% | 6.05% | 0.00% | NA |
| Indica III | 21 | 85.70% | 5.30% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 92.60% | 1.70% | 5.79% | 0.00% | NA |
| Temperate Japonica | 189 | 95.80% | 0.00% | 4.23% | 0.00% | NA |
| Tropical Japonica | 36 | 91.70% | 0.00% | 8.33% | 0.00% | NA |
| Japonica Intermediate | 19 | 94.70% | 0.00% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Intermediate | 231 | 93.50% | 1.40% | 5.19% | 0.00% | NA |