CCCCGAGCACCGCCGCGCTGGGCCCGCCCCGCGCGTCGGCGCCCTCGTCCGCGTCCCCGTCCTTTGCGCCGTCGTCGTAGTCCGCGCTCCGCTCCGACCG[CGCCGTC/C]
GCCGTCGCCGGCGGCGCCATCACCGGGAACCCGTACTTGTCGCACGGCGCCACGCCGATGGCGATCTCGGCGGACAGCACCGACCGGTTGTAGCACAGCT
AGCTGTGCTACAACCGGTCGGTGCTGTCCGCCGAGATCGCCATCGGCGTGGCGCCGTGCGACAAGTACGGGTTCCCGGTGATGGCGCCGCCGGCGACGGC[GACGGCG/G]
CGGTCGGAGCGGAGCGCGGACTACGACGACGGCGCAAAGGACGGGGACGCGGACGAGGGCGCCGACGCGCGGGGCGGGCCCAGCGCGGCGGTGCTCGGGG
| Populations | Population Size | Frequency of C(primary allele) | Frequency of CGCCGTC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 60.70% | 35.60% | 5.68% | 0.00% | NA |
| All Indica | 492 | 90.70% | 4.70% | 4.88% | 0.00% | NA |
| All Japonica | 244 | 4.80% | 88.90% | 6.56% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 90.70% | 4.70% | 4.88% | 0.00% | NA |
| Indica II | 215 | 96.70% | 0.00% | 3.26% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 86.80% | 6.20% | 7.37% | 0.00% | NA |
| Temperate Japonica | 189 | 1.70% | 90.50% | 7.94% | 0.00% | NA |
| Tropical Japonica | 36 | 5.70% | 91.70% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 31.60% | 68.40% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 11.10% | 88.90% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 76.20% | 17.40% | 7.79% | 0.00% | NA |