GCTTCCATATTCCTGAAATGGGACTTGTTTCATGTCTTGGAAGAATGACCTTGAGGCCAACTCATGGAAAATATAGTTTCCAATGGTTTCTAGAGGGACA[TTT/TT]
TTTTTCGTCTGGGATAAAGCCATTGGCCATCCATACGTGGATTAGATTGTCTACGTCAATCACATAATCTTTGGGAAACATAGCACAGAAAGCAAAGCAT
ATGCTTTGCTTTCTGTGCTATGTTTCCCAAAGATTATGTGATTGACGTAGACAATCTAATCCACGTATGGATGGCCAATGGCTTTATCCCAGACGAAAAA[AAA/AA]
TGTCCCTCTAGAAACCATTGGAAACTATATTTTCCATGAGTTGGCCTCAAGGTCATTCTTCCAAGACATGAAACAAGTCCCATTTCAGGAATATGGAAGC
| Populations | Population Size | Frequency of TT(primary allele) | Frequency of TTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 66.40% | 27.90% | 7.88% | 0.00% | NA |
| All Indica | 492 | 88.40% | 2.20% | 9.55% | 0.00% | NA |
| All Japonica | 244 | 23.60% | 73.00% | 4.51% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 88.40% | 2.20% | 9.55% | 0.00% | NA |
| Indica II | 215 | 91.60% | 3.00% | 5.58% | 0.00% | NA |
| Indica III | 21 | 90.50% | 5.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 82.10% | 2.50% | 15.79% | 0.00% | NA |
| Temperate Japonica | 189 | 9.50% | 85.70% | 5.29% | 0.00% | NA |
| Tropical Japonica | 36 | 91.70% | 5.70% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 26.30% | 73.70% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Intermediate | 231 | 73.60% | 14.60% | 13.85% | 0.00% | NA |