ACACAATCATGTGCCTTGTGTTCTGGCGAAAAAGGTTACTATCATGTGCGGATTGCATATTTCCAAGTCTTTGGCTTCATTAATTTTGGCCCTGGTCACA[GA/GG]
TGATGATGTTGGAAGACATACGTATAAGTTAATGTACCATGAAAAATATAAATCTATATATAGGCATTACACAAAAAGTATCATAGTATATATCTTGAGT
ACTCAAGATATATACTATGATACTTTTTGTGTAATGCCTATATATAGATTTATATTTTTCATGGTACATTAACTTATACGTATGTCTTCCAACATCATCA[TC/CC]
TGTGACCAGGGCCAAAATTAATGAAGCCAAAGACTTGGAAATATGCAATCCGCACATGATAGTAACCTTTTTCGCCAGAACACAAGGCACATGATTGTGT
| Populations | Population Size | Frequency of GA(primary allele) | Frequency of GG(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 88.20% | 5.70% | 6.46% | 0.00% | NA |
| All Indica | 492 | 82.50% | 8.60% | 9.76% | 0.00% | NA |
| All Japonica | 244 | 98.40% | 1.20% | 0.41% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 82.50% | 8.60% | 9.76% | 0.00% | NA |
| Indica II | 215 | 87.90% | 6.00% | 6.51% | 0.00% | NA |
| Indica III | 21 | 66.70% | 26.30% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 75.30% | 13.30% | 13.16% | 0.00% | NA |
| Temperate Japonica | 189 | 98.90% | 0.50% | 0.53% | 0.00% | NA |
| Tropical Japonica | 36 | 94.40% | 5.60% | 0.00% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 79.70% | 10.70% | 10.82% | 0.00% | NA |