ACATTGGCGGAGGCCACGACACAACTGCCACACAGACACGAGACTCGCCACACATGGACCTGACACGACCGGACTCGAGCACAGCACGACGTATATAGCT[TCTCTC/TCT]
CTTCTCAGCCAGAGATCTCAATGGCCTTCACCTCGGGCTTCTTGACCTCAGCCTTGGGCACGGTGACGGTGAGCACGCCGTTCTCCATGCTGGCCTTCAC
GTGAAGGCCAGCATGGAGAACGGCGTGCTCACCGTCACCGTGCCCAAGGCTGAGGTCAAGAAGCCCGAGGTGAAGGCCATTGAGATCTCTGGCTGAGAAG[GAGAGA/AGA]
AGCTATATACGTCGTGCTGTGCTCGAGTCCGGTCGTGTCAGGTCCATGTGTGGCGAGTCTCGTGTCTGTGTGGCAGTTGTGTCGTGGCCTCCGCCAATGT
| Populations | Population Size | Frequency of TCTCTC(primary allele) | Frequency of TCT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 92.20% | 5.20% | 2.71% | 0.00% | NA |
| All Indica | 492 | 89.80% | 6.80% | 3.66% | 0.00% | NA |
| All Japonica | 244 | 98.80% | 0.00% | 1.23% | 0.00% | NA |
| Aus | 7 | 28.60% | 71.40% | 0.00% | 0.00% | NA |
| Indica I | 492 | 89.80% | 6.80% | 3.66% | 0.00% | NA |
| Indica II | 215 | 95.80% | 3.70% | 0.47% | 0.00% | NA |
| Indica III | 21 | 85.70% | 10.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 83.20% | 11.20% | 6.32% | 0.00% | NA |
| Temperate Japonica | 189 | 99.50% | 0.00% | 0.53% | 0.00% | NA |
| Tropical Japonica | 36 | 97.20% | 0.00% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 94.70% | 0.00% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 11.10% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 85.30% | 9.60% | 5.63% | 0.00% | NA |