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Detailed information for vg0826744653:

Variant ID: vg0826744653 (JBrowse)	Variation Type: SNP
Chromosome: chr08	Position: 26744653
Reference Allele: G	Alternative Allele: A
Primary Allele: G	Secondary Allele: A

Inferred Ancestral Allele : G (evidence from allele frequency in Oryza rufipogon: G: 1.00, A: 0.00, others allele: 0.00, population size: 227. )

Flanking Sequence (100 bp) in Reference Genome:

AACTTAACTGCTTGTTTGTTGGGCAACTCGAGGAAAAGGATGCTGAGATTAAGAGGAGAATTTGATTTTTAATCTCAGTATCTTGTTTGGTAGAGGTAAT[G/A]
GAAATTGATAGAGAGTTTAGTTAAAGATTAGATCATTAATGATAACGGATGGCTAAAATTTATTTAGGCAAACTAAAGGAGGAATTCTCTCCCAATTACC

Reverse complement sequence

GGTAATTGGGAGAGAATTCCTCCTTTAGTTTGCCTAAATAAATTTTAGCCATCCGTTATCATTAATGATCTAATCTTTAACTAAACTCTCTATCAATTTC[C/T]
ATTACCTCTACCAAACAAGATACTGAGATTAAAAATCAAATTCTCCTCTTAATCTCAGCATCCTTTTCCTCGAGTTGCCCAACAAACAAGCAGTTAAGTT

Allele Frequencies:

Allele Effect:

Putative Genotype-Phenotype Associations: