CCCGAACCTCGCCAGGTACCGCTTCAGCTCCGCGAGCCCCGTGACATGGCTCCCTCGCCCCGCGTCGAGCAGCTGCTTGAACGAGTGCCACGCCACGCCG[CCGTGCCCGTGC/CCGTGCCCGTGCCCGTGCCCGTGC]
ACCACGGGGAGCCCGAGCACCACCACCATCGCCACGGCGGCGACCAGGCACGACGCGGCAGCCGCGCGGCGACATAGGAACATGAGAGCGCGCGCGGCGT
ACGCCGCGCGCGCTCTCATGTTCCTATGTCGCCGCGCGGCTGCCGCGTCGTGCCTGGTCGCCGCCGTGGCGATGGTGGTGGTGCTCGGGCTCCCCGTGGT[GCACGGGCACGG/GCACGGGCACGGGCACGGGCACGG]
CGGCGTGGCGTGGCACTCGTTCAAGCAGCTGCTCGACGCGGGGCGAGGGAGCCATGTCACGGGGCTCGCGGAGCTGAAGCGGTACCTGGCGAGGTTCGGG
| Populations | Population Size | Frequency of CCGTGCCCGTGC(primary allele) | Frequency of CCGTGCCCGTGCCCGTGCCC GTGC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 68.10% | 26.30% | 7.62% | 0.00% | NA |
| All Indica | 492 | 52.60% | 41.80% | 9.55% | 0.00% | NA |
| All Japonica | 244 | 95.90% | 0.00% | 4.10% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 52.60% | 41.80% | 9.55% | 0.00% | NA |
| Indica II | 215 | 79.10% | 17.10% | 4.65% | 0.00% | NA |
| Indica III | 21 | 38.90% | 52.40% | 14.29% | 0.00% | NA |
| Indica Intermediate | 190 | 44.20% | 48.80% | 13.68% | 0.00% | NA |
| Temperate Japonica | 189 | 95.80% | 0.00% | 4.23% | 0.00% | NA |
| Tropical Japonica | 36 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Japonica Intermediate | 19 | 89.50% | 0.00% | 10.53% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Intermediate | 231 | 51.90% | 40.60% | 12.55% | 0.00% | NA |