TTCGCCGAGCTCGGCCACAGGGCGGCGCGGCCGCGGGTGTGGCGCGCCGCGCCGCCCGACGAGGTGCTCTGGTTTCTCCGGCGAGACGCCGATCGGGGAT[AAA/AA,AAAA]
AAAAAAATACTGACCAAATGGCGCCTCACGAACTGTTTGATTCTGATCTGATCGCCCCTACAGGTTAGTTTAATTTGGGAGATCGATCATGTAGAGGTTA
TAACCTCTACATGATCGATCTCCCAAATTAAACTAACCTGTAGGGGCGATCAGATCAGAATCAAACAGTTCGTGAGGCGCCATTTGGTCAGTATTTTTTT[TTT/TT,TTTT]
ATCCCCGATCGGCGTCTCGCCGGAGAAACCAGAGCACCTCGTCGGGCGGCGCGGCGCGCCACACCCGCGGCCGCGCCGCCCTGTGGCCGAGCTCGGCGAA
| Populations | Population Size | Frequency of AAA(primary allele) | Frequency of AAAA(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 88.20% | 1.60% | 8.79% | 0.00% | NA |
| All Indica | 492 | 88.40% | 0.00% | 9.15% | 0.00% | NA; AA: 0.70% |
| All Japonica | 244 | 91.00% | 0.00% | 8.61% | 0.00% | NA; AA: 0.40% |
| Aus | 7 | 0.00% | 28.60% | 0.00% | 0.00% | NA; AAAA: 71.40% |
| Indica I | 492 | 88.40% | 0.00% | 9.15% | 0.00% | NA; AA: 0.70% |
| Indica II | 215 | 88.40% | 0.00% | 9.30% | 0.00% | NA; AA: 1.00% |
| Indica III | 21 | 85.70% | 0.00% | 4.76% | 0.00% | NA; AA: 5.00% |
| Indica Intermediate | 190 | 86.80% | 0.00% | 11.05% | 0.00% | NA; AA: 0.60% |
| Temperate Japonica | 189 | 93.10% | 0.00% | 6.88% | 0.00% | NA |
| Tropical Japonica | 36 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Japonica Intermediate | 19 | 73.70% | 0.00% | 21.05% | 0.00% | NA; AA: 6.70% |
| VI/Aromatic | 9 | 77.80% | 0.00% | 11.11% | 0.00% | NA; AA: 12.50% |
| Intermediate | 231 | 85.70% | 1.50% | 11.26% | 0.00% | NA |