GGGATGTAACCTTGTTGGCGTTTGGGACTAGCTCCTGCAGCGATTTCATCCGCTCCGCTATCCTCTCCCTCCGAAGCTGAAAATAACATGAACAATACAC[AA/AAA]
AAAGTTGAGAAGAAAAATGGAAATGTTGCTCAAGTTCCATTTATTTTTTGGTTGAAACTTGAAAGAGGCAGTAATAATTGTAAGATGATTTCGTGAACAG
CTGTTCACGAAATCATCTTACAATTATTACTGCCTCTTTCAAGTTTCAACCAAAAAATAAATGGAACTTGAGCAACATTTCCATTTTTCTTCTCAACTTT[TT/TTT]
GTGTATTGTTCATGTTATTTTCAGCTTCGGAGGGAGAGGATAGCGGAGCGGATGAAATCGCTGCAGGAGCTAGTCCCAAACGCCAACAAGGTTACATCCC
| Populations | Population Size | Frequency of AA(primary allele) | Frequency of AAA(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 53.90% | 43.00% | 5.43% | 0.00% | NA |
| All Indica | 492 | 33.50% | 62.80% | 5.49% | 0.00% | NA |
| All Japonica | 244 | 94.30% | 0.40% | 5.33% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 33.50% | 62.80% | 5.49% | 0.00% | NA |
| Indica II | 215 | 44.60% | 52.60% | 5.12% | 0.00% | NA |
| Indica III | 21 | 45.00% | 52.40% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 26.60% | 71.10% | 3.16% | 0.00% | NA |
| Temperate Japonica | 189 | 93.10% | 0.60% | 6.35% | 0.00% | NA |
| Tropical Japonica | 36 | 97.20% | 0.00% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 37.50% | 60.60% | 3.03% | 0.00% | NA |