GGTAACCATTTGCTCGGTTAAAGTTTTTTTAGTCACTAAGATGAGTGATGCATAGTCTTGTTGGTTGCATTGTCATAATGGCATCCGGGTTTTACATTTT[TTAAAAAATATT/TAAAAAAATATT]
GAGTGTACTCTGATGCTTTTTCTATAGTAAAAATGCACATTGCACACGAGCCGATGTCCGATTTTAAAAGAAAACAAAAATTTCAGGTTCATCACAATCA
TGATTGTGATGAACCTGAAATTTTTGTTTTCTTTTAAAATCGGACATCGGCTCGTGTGCAATGTGCATTTTTACTATAGAAAAAGCATCAGAGTACACTC[AATATTTTTTAA/AATATTTTTTTA]
AAAATGTAAAACCCGGATGCCATTATGACAATGCAACCAACAAGACTATGCATCACTCATCTTAGTGACTAAAAAAACTTTAACCGAGCAAATGGTTACC
| Populations | Population Size | Frequency of TTAAAAAATATT(primary allele) | Frequency of TAAAAAAATATT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 62.50% | 30.40% | 10.21% | 0.00% | NA |
| All Indica | 492 | 49.20% | 45.10% | 10.37% | 0.00% | NA |
| All Japonica | 244 | 88.10% | 0.90% | 11.07% | 0.00% | NA |
| Aus | 7 | 42.90% | 57.10% | 0.00% | 0.00% | NA |
| Indica I | 492 | 49.20% | 45.10% | 10.37% | 0.00% | NA |
| Indica II | 215 | 33.70% | 60.50% | 8.84% | 0.00% | NA |
| Indica III | 21 | 71.40% | 25.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 53.20% | 40.20% | 11.05% | 0.00% | NA |
| Temperate Japonica | 189 | 88.90% | 0.00% | 11.11% | 0.00% | NA |
| Tropical Japonica | 36 | 86.10% | 3.10% | 11.11% | 0.00% | NA |
| Japonica Intermediate | 19 | 84.20% | 5.90% | 10.53% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 57.10% | 36.20% | 10.39% | 0.00% | NA |