GACGCGCCACCTGGTTTTGTCGTCGGGCCTCGCGAAGGCGCAGAAGCCGCCGTACTCGCGCTTGGCCGTCGCCTTCCCCGCGGCGGCGGCGGATGCAGAA[G/GAGG]
AGGAGGGCGCGACGCCGGCGACGGTCAGCTTGGCCATCGCCTTCTCCGCGGCGGCGGATGCAGAAGAGGAGGAGGACGCGACGGCGACGCTCAGCCTGGT
ACCAGGCTGAGCGTCGCCGTCGCGTCCTCCTCCTCTTCTGCATCCGCCGCCGCGGAGAAGGCGATGGCCAAGCTGACCGTCGCCGGCGTCGCGCCCTCCT[C/CCTC]
TTCTGCATCCGCCGCCGCCGCGGGGAAGGCGACGGCCAAGCGCGAGTACGGCGGCTTCTGCGCCTTCGCGAGGCCCGACGACAAAACCAGGTGGCGCGTC
| Populations | Population Size | Frequency of GAGG(primary allele) | Frequency of G(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 62.30% | 35.40% | 3.62% | 0.00% | NA |
| All Indica | 492 | 93.30% | 3.80% | 3.05% | 0.00% | NA |
| All Japonica | 244 | 2.10% | 94.70% | 3.28% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 93.30% | 3.80% | 3.05% | 0.00% | NA |
| Indica II | 215 | 94.40% | 2.40% | 3.26% | 0.00% | NA |
| Indica III | 21 | 90.50% | 5.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 90.00% | 6.60% | 3.68% | 0.00% | NA |
| Temperate Japonica | 189 | 2.20% | 95.20% | 2.65% | 0.00% | NA |
| Tropical Japonica | 36 | 2.90% | 91.70% | 5.56% | 0.00% | NA |
| Japonica Intermediate | 19 | 0.00% | 94.70% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 78.80% | 16.50% | 5.63% | 0.00% | NA |