GATTTAGCCATTAACCACCTGTTTTTGCTGCATGGGTGCAGAGAATTTGCAGATTACCTAAATATCCACCTACAAGTCTTCTATTTTCTCTCCCATCACA[TT/TTT]
TTTTTGCATGGATTGAGCTAGTCACTCCATGTTCTTGGGAGAGGGTAGAAACGTAAAAAAGAGACCTGTCTTTTTCTAGGGCCTGTTTATCAAGGGGAGT
ACTCCCCTTGATAAACAGGCCCTAGAAAAAGACAGGTCTCTTTTTTACGTTTCTACCCTCTCCCAAGAACATGGAGTGACTAGCTCAATCCATGCAAAAA[AA/AAA]
TGTGATGGGAGAGAAAATAGAAGACTTGTAGGTGGATATTTAGGTAATCTGCAAATTCTCTGCACCCATGCAGCAAAAACAGGTGGTTAATGGCTAAATC
| Populations | Population Size | Frequency of TT(primary allele) | Frequency of TTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 80.90% | 16.60% | 2.97% | 0.00% | NA |
| All Indica | 492 | 70.30% | 26.50% | 4.27% | 0.00% | NA |
| All Japonica | 244 | 99.60% | 0.00% | 0.41% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 70.30% | 26.50% | 4.27% | 0.00% | NA |
| Indica II | 215 | 90.20% | 7.60% | 2.33% | 0.00% | NA |
| Indica III | 21 | 61.90% | 38.10% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 66.80% | 29.80% | 4.74% | 0.00% | NA |
| Temperate Japonica | 189 | 99.50% | 0.00% | 0.53% | 0.00% | NA |
| Tropical Japonica | 36 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 72.70% | 24.30% | 3.90% | 0.00% | NA |