TTGTATTCAGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCTTCGTACTGAACGCACAATGCTGCAACTGCTGCTAGCTG[AAAA/AAA]
AAAATCATGAAAGAAAAAACAATGGCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCTACCTTTGCGACAGCCTTCGGAGGGTAA
TTACCCTCCGAAGGCTGTCGCAAAGGTAGCTATACTGTAGCAAATCTGACAAAATTCAGAAAGCAGCAGTGAGTGCCATTGTTTTTTCTTTCATGATTTT[TTTT/TTT]
CAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAA
| Populations | Population Size | Frequency of AAA(primary allele) | Frequency of AAAA(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 64.10% | 34.00% | 2.84% | 0.00% | NA |
| All Indica | 492 | 95.50% | 1.50% | 3.05% | 0.00% | NA |
| All Japonica | 244 | 3.70% | 94.70% | 1.64% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 95.50% | 1.50% | 3.05% | 0.00% | NA |
| Indica II | 215 | 96.30% | 1.00% | 2.79% | 0.00% | NA |
| Indica III | 21 | 90.50% | 0.00% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 94.70% | 1.10% | 4.21% | 0.00% | NA |
| Temperate Japonica | 189 | 3.20% | 95.20% | 1.59% | 0.00% | NA |
| Tropical Japonica | 36 | 2.90% | 94.40% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 10.50% | 89.50% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 83.10% | 12.70% | 4.76% | 0.00% | NA |