TGCTGTTTGTTAAATGAGAAAAAGAATAAGCACAAGCAAAAGAATGCAAGAACGGCGTAGAGCATCTCGCTGACTACACCATTTGAGCCGGCAATGGCGG[CGCCGCCG/CGCCG]
TGGCGAAGGCGTTGCGCCGGCAGACCGGGCAGGTGGAGTTGCCCCGCAGCCACGCGTCGATGCACCGCTGGTGGAACACGTGCAGGCACGCCGGCAGCCG
CGGCTGCCGGCGTGCCTGCACGTGTTCCACCAGCGGTGCATCGACGCGTGGCTGCGGGGCAACTCCACCTGCCCGGTCTGCCGGCGCAACGCCTTCGCCA[CGGCGGCG/CGGCG]
CCGCCATTGCCGGCTCAAATGGTGTAGTCAGCGAGATGCTCTACGCCGTTCTTGCATTCTTTTGCTTGTGCTTATTCTTTTTCTCATTTAACAAACAGCA
| Populations | Population Size | Frequency of CGCCGCCG(primary allele) | Frequency of CGCCG(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 81.50% | 12.50% | 6.85% | 0.00% | NA |
| All Indica | 492 | 76.80% | 16.40% | 8.13% | 0.00% | NA |
| All Japonica | 244 | 88.90% | 6.90% | 4.51% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 76.80% | 16.40% | 8.13% | 0.00% | NA |
| Indica II | 215 | 90.70% | 7.10% | 2.33% | 0.00% | NA |
| Indica III | 21 | 85.70% | 10.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 73.70% | 15.70% | 12.63% | 0.00% | NA |
| Temperate Japonica | 189 | 95.80% | 1.10% | 3.17% | 0.00% | NA |
| Tropical Japonica | 36 | 50.00% | 41.90% | 13.89% | 0.00% | NA |
| Japonica Intermediate | 19 | 94.70% | 5.30% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 77.50% | 13.10% | 10.82% | 0.00% | NA |