CCATGTCACGACGCGCGTCGCCGGCACGCACGGCTACCTCTCGCCGGAGTACGCGCTGTACGGGCAGCTCACCGAGAAGAGCGACGTGTACAGCTTCGGC[GTGCTGGTGC/GTGCTGGTGT]
TGGAGGTGATGAGCGGCCGGCGCGCGCTCGACCTGTCCGACCCCTCCGGCGTCGTGCTGATCACCGACTGGGCGTGGGCGCTCGTCAGGGCCGGGCGCGC
GCGCGCCCGGCCCTGACGAGCGCCCACGCCCAGTCGGTGATCAGCACGACGCCGGAGGGGTCGGACAGGTCGAGCGCGCGCCGGCCGCTCATCACCTCCA[GCACCAGCAC/ACACCAGCAC]
GCCGAAGCTGTACACGTCGCTCTTCTCGGTGAGCTGCCCGTACAGCGCGTACTCCGGCGAGAGGTAGCCGTGCGTGCCGGCGACGCGCGTCGTGACATGG
| Populations | Population Size | Frequency of GTGCTGGTGT(primary allele) | Frequency of GTGCTGGTGC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 49.60% | 45.50% | 8.91% | 0.00% | NA |
| All Indica | 492 | 70.70% | 21.60% | 9.76% | 0.00% | NA |
| All Japonica | 244 | 7.10% | 85.20% | 8.20% | 0.00% | NA |
| Aus | 7 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica I | 492 | 70.70% | 21.60% | 9.76% | 0.00% | NA |
| Indica II | 215 | 84.20% | 7.20% | 9.30% | 0.00% | NA |
| Indica III | 21 | 47.60% | 47.40% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 65.30% | 27.90% | 9.47% | 0.00% | NA |
| Temperate Japonica | 189 | 6.90% | 85.70% | 7.94% | 0.00% | NA |
| Tropical Japonica | 36 | 3.00% | 88.90% | 8.33% | 0.00% | NA |
| Japonica Intermediate | 19 | 17.60% | 73.70% | 10.53% | 0.00% | NA |
| VI/Aromatic | 9 | 11.10% | 88.90% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 60.20% | 33.80% | 9.09% | 0.00% | NA |