GGCGGCAGCGCGCGGTTCCGGCACATCATGCGGGAGCGGCTGCGTCGGGAGCGCCTCAGCCAGGGCTACGCCGACCTCCAAGCCATCCTCCCAACCGGCG[CATCATC/CATCATT]
ATCAAAAGTACTCGTAAAATCACTCATCAGGAACTACATGAGCGTGCGTTCTTTTCAATTGTTCGATCGTCCTGCTCGGCTCATCATTTTTCGCCGCCAT
ATGGCGGCGAAAAATGATGAGCCGAGCAGGACGATCGAACAATTGAAAAGAACGCACGCTCATGTAGTTCCTGATGAGTGATTTTACGAGTACTTTTGAT[GATGATG/AATGATG]
CGCCGGTTGGGAGGATGGCTTGGAGGTCGGCGTAGCCCTGGCTGAGGCGCTCCCGACGCAGCCGCTCCCGCATGATGTGCCGGAACCGCGCGCTGCCGCC
| Populations | Population Size | Frequency of CATCATC(primary allele) | Frequency of CATCATT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 84.20% | 11.70% | 4.65% | 0.00% | NA |
| All Indica | 492 | 77.20% | 17.90% | 5.89% | 0.00% | NA |
| All Japonica | 244 | 97.50% | 0.00% | 2.46% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 77.20% | 17.90% | 5.89% | 0.00% | NA |
| Indica II | 215 | 80.90% | 15.50% | 4.19% | 0.00% | NA |
| Indica III | 21 | 61.90% | 35.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 78.90% | 15.30% | 6.84% | 0.00% | NA |
| Temperate Japonica | 189 | 96.80% | 0.00% | 3.17% | 0.00% | NA |
| Tropical Japonica | 36 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 81.40% | 13.80% | 5.63% | 0.00% | NA |