CAGCCCTGGCACGCACTTTCCCAGCCAAAAACTCTCGTACTCCAGCTCGTATAAATACGAACGTAACACAAACATCACGCCTGATCTGATCGATCAAGCG[A/AA]
AAAAAATCGTACTTAATTAGGAGCAAGCAATGGCTTCTCGCCGCCTCCCGTTCGCGGCGGTCACCGCCGTGATCCTCCTCCTCCACGGCGCCGCCGACGC
GCGTCGGCGGCGCCGTGGAGGAGGAGGATCACGGCGGTGACCGCCGCGAACGGGAGGCGGCGAGAAGCCATTGCTTGCTCCTAATTAAGTACGATTTTTT[T/TT]
CGCTTGATCGATCAGATCAGGCGTGATGTTTGTGTTACGTTCGTATTTATACGAGCTGGAGTACGAGAGTTTTTGGCTGGGAAAGTGCGTGCCAGGGCTG
| Populations | Population Size | Frequency of AA(primary allele) | Frequency of A(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 63.20% | 34.30% | 3.88% | 0.00% | NA |
| All Indica | 492 | 94.30% | 3.30% | 2.44% | 0.00% | NA |
| All Japonica | 244 | 3.50% | 91.40% | 5.33% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 94.30% | 3.30% | 2.44% | 0.00% | NA |
| Indica II | 215 | 94.00% | 3.80% | 2.33% | 0.00% | NA |
| Indica III | 21 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 92.60% | 4.30% | 3.16% | 0.00% | NA |
| Temperate Japonica | 189 | 3.30% | 92.10% | 4.76% | 0.00% | NA |
| Tropical Japonica | 36 | 0.00% | 88.90% | 11.11% | 0.00% | NA |
| Japonica Intermediate | 19 | 10.50% | 89.50% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 11.10% | 88.90% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 81.40% | 14.90% | 4.33% | 0.00% | NA |