TGGATTGAATAAAATTTAGTGTGATCTTTCAACTAGTTTGGATGTGATGTTCTTGGTTGTTACTGTCTAACACCCTTATTGGTTATGTGCCACTTCAATA[TTT/TT]
TTTTTTTAATCTTTGTTACTCTGTTACCAATTATTTCACCCTTGACAATGTTTTGCTTGGCAGGTATTGTGTTGTTCTTGATGATATATGGAGTATTTCT
AGAAATACTCCATATATCATCAAGAACAACACAATACCTGCCAAGCAAAACATTGTCAAGGGTGAAATAATTGGTAACAGAGTAACAAAGATTAAAAAAA[AAA/AA]
TATTGAAGTGGCACATAACCAATAAGGGTGTTAGACAGTAACAACCAAGAACATCACATCCAAACTAGTTGAAAGATCACACTAAATTTTATTCAATCCA
| Populations | Population Size | Frequency of TT(primary allele) | Frequency of TTT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 68.30% | 28.40% | 4.52% | 0.00% | NA |
| All Indica | 492 | 96.30% | 0.60% | 3.05% | 0.00% | NA |
| All Japonica | 244 | 13.20% | 80.70% | 6.97% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 96.30% | 0.60% | 3.05% | 0.00% | NA |
| Indica II | 215 | 96.70% | 0.50% | 2.79% | 0.00% | NA |
| Indica III | 21 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Indica Intermediate | 190 | 96.30% | 1.10% | 2.63% | 0.00% | NA |
| Temperate Japonica | 189 | 13.60% | 80.40% | 6.88% | 0.00% | NA |
| Tropical Japonica | 36 | 3.00% | 88.90% | 8.33% | 0.00% | NA |
| Japonica Intermediate | 19 | 27.80% | 68.40% | 5.26% | 0.00% | NA |
| VI/Aromatic | 9 | 88.90% | 11.10% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 86.10% | 10.80% | 3.46% | 0.00% | NA |