GCAGGAGGACGATCCACCTCAAGAGCAAGGATGGCAAGCAGCATGATGTGACGGAGGCGTCGGCGAGGCTGTCCAAGACCATCGCCGGGATGATTCTCGC[CGGCGGCGGC/C]
GGCGGCGGCGCCGACCAGTGCATCCCGACCCCCGACATCGACCACGATACCCTCCGCGTGGTGATGCAGTACTGCGACAAGCACGCCGCCGACGACGCCG
CGGCGTCGTCGGCGGCGTGCTTGTCGCAGTACTGCATCACCACGCGGAGGGTATCGTGGTCGATGTCGGGGGTCGGGATGCACTGGTCGGCGCCGCCGCC[GCCGCCGCCG/G]
GCGAGAATCATCCCGGCGATGGTCTTGGACAGCCTCGCCGACGCCTCCGTCACATCATGCTGCTTGCCATCCTTGCTCTTGAGGTGGATCGTCCTCCTGC
| Populations | Population Size | Frequency of C(primary allele) | Frequency of CGGCGGCGGC(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 58.90% | 38.00% | 5.04% | 0.00% | NA |
| All Indica | 492 | 90.40% | 6.30% | 3.46% | 0.00% | NA |
| All Japonica | 244 | 0.00% | 92.20% | 7.79% | 0.00% | NA |
| Aus | 7 | 85.70% | 14.30% | 0.00% | 0.00% | NA |
| Indica I | 492 | 90.40% | 6.30% | 3.46% | 0.00% | NA |
| Indica II | 215 | 89.80% | 7.70% | 2.79% | 0.00% | NA |
| Indica III | 21 | 95.20% | 0.00% | 4.76% | 0.00% | NA |
| Indica Intermediate | 190 | 90.00% | 6.60% | 3.68% | 0.00% | NA |
| Temperate Japonica | 189 | 0.00% | 92.10% | 7.94% | 0.00% | NA |
| Tropical Japonica | 36 | 0.00% | 88.90% | 11.11% | 0.00% | NA |
| Japonica Intermediate | 19 | 0.00% | 100.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 11.10% | 88.90% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 75.80% | 20.80% | 4.33% | 0.00% | NA |