ATTTCAAAGGTCCATTCGTTTCATTGACTCGTCCAAGTTCTGTAAAAAAAAAATATAAATAGTTCAAATGATCAATATTTCTAAGCAAAAAAAAGATACA[TTT/TT]
TTTCTAAAATAAAGCATTAATAAAGCTTTCTAAAATATTGAATTATTGGTGATGATAAATTTGTTTTCCATCAAGTGATTATCCAGAATTTGTAGGCCAA
TTGGCCTACAAATTCTGGATAATCACTTGATGGAAAACAAATTTATCATCACCAATAATTCAATATTTTAGAAAGCTTTATTAATGCTTTATTTTAGAAA[AAA/AA]
TGTATCTTTTTTTTGCTTAGAAATATTGATCATTTGAACTATTTATATTTTTTTTTTACAGAACTTGGACGAGTCAATGAAACGAATGGACCTTTGAAAT
| Populations | Population Size | Frequency of TTT(primary allele) | Frequency of TT(secondary allele) | Frequency of N | Frequency of DEL | Frequency of others Allele |
|---|---|---|---|---|---|---|
| All | 774 | 65.80% | 31.00% | 4.65% | 0.00% | NA |
| All Indica | 492 | 47.20% | 49.60% | 6.50% | 0.00% | NA |
| All Japonica | 244 | 99.20% | 0.00% | 0.82% | 0.00% | NA |
| Aus | 7 | 85.70% | 0.00% | 14.29% | 0.00% | NA |
| Indica I | 492 | 47.20% | 49.60% | 6.50% | 0.00% | NA |
| Indica II | 215 | 65.60% | 29.90% | 6.51% | 0.00% | NA |
| Indica III | 21 | 42.10% | 52.40% | 9.52% | 0.00% | NA |
| Indica Intermediate | 190 | 43.60% | 53.70% | 4.74% | 0.00% | NA |
| Temperate Japonica | 189 | 99.50% | 0.00% | 0.53% | 0.00% | NA |
| Tropical Japonica | 36 | 97.20% | 0.00% | 2.78% | 0.00% | NA |
| Japonica Intermediate | 19 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| VI/Aromatic | 9 | 100.00% | 0.00% | 0.00% | 0.00% | NA |
| Intermediate | 231 | 51.10% | 46.60% | 4.33% | 0.00% | NA |